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The Best Accounting Apps for Ecommerce

Track your financials and keep your business running smoothly with a specialized Ecommerce accounting app.

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What are Accounting apps for Ecommerce?

Ecommerce accounting apps offer a wide range of financial management services to help with the smooth running (and incremental optimization) of your ecommerce business. From bookkeeping to financial reporting, tax services and expert advice, accounting apps help improve margins and profitability without the commitment, responsibility and expense of hiring additional team members.


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What is Rho?

Rho is a financial management platform with a specific focus in helping Ecommerce merchants.

What is TaxJar?

TaxJar (acquired by Stripe) is working to make sales tax compliance easier for merchants, solving tax issues across different states, regions and countries.

What is Clearco?

Clearco is officially the world's largest ecommerce investor, having made over $2.2 billion in investments across over 5,500 Ecommerce businesses.

What is Sufio?

Sufio is an invoicing app that automatically creates invoices for B2B or wholesale orders, while maintaining tax and other compliance in over 50 countries.

What is Brightpearl by Sage?

Automate your operations, intelligently plan your inventory and make your investments go further with the #1 Retail Operating System

What is Bean Ninjas?

Bean Ninjas are an international team of Ecommerce growth accountants that work to optimize your account strategy and take care of all of your accounting needs.

What is Parker?

Parker is a comprehensive financial solution specifically designed to help Ecommerce merchants take control of their finances and improve cash flow.

What is BeProfit?

Profit analysis dashboard for keeping accurate track of profits, expenses, and optimizing your bottom line.

What is Melio?

Easy Bill Paying Service for Businesses

What is Ottit?

A financial back-office solution that removes the guess work from bookkeeping for your booming business.

What is Wallester?

Helping businesses with expense management and optimization.

What is Maverick Payments?

Advanced payment gateway with built-in fraud prevention and analytics.

What is Fully Accountable?

Fully Accountable is an Ecommerce-focused accounting firm combining the functions of accounting and finance for less than the cost of an entry level employee.

What is Redo?

A return management platform that aims at improving the returns process by focusing on boosting sales and cultivating customer loyalty

What is Genie?

A cutting-edge tool designed to streamline inventory analysis, planning, and ordering processes for online merchants

What is Macaroni?

Macaroni is an end-to-end SEO platform designed specifically for Shopify users.

What is Tidio?

All-in-one customer experience solution with live chat, AI chatbots, and multichannel communication

What is Moast? is a solution that eCommerce brands can use to connect their prospective customers with existing customers for real life demos.

What is Decile?

Customer data platform that provides strategic insights that help you act on your analytics to actually grow your store.

What is

All about helping merchants gather and display customer reviews and user-generated content to actually have an effect on sales

What is Omnisend?

Omnichannel Marketing Automation Built for eCommerce

Why use Accounting apps?

Once you’ve worked out your market position, found the perfect audience and refined your offering, you can consider bringing in a third party to help manage the financial back office of your ecommerce business. By working with an accounting app that specializes in the ecommerce space, you can be assured you’re getting the best, most tailored advice. 

What’s at stake? Beyond freeing up internal operational bandwidth, a more complete and nuanced overview of your financial performance will start to illuminate opportunities for improvement. Ecommerce accounting apps are specialized in the metrics that matter to your business – so advice will be relevant and based on genuine expertise.

When should you be investing in Accounting apps?

Show us an ecommerce business that wouldn’t benefit from improved financial performance and reporting! But there’s a sweet spot for seeing transformational benefits from accounting apps.

At around $1-2 million+ annual revenue and if your business is starting to scale or become more complex in terms of sales channels or inventory flow, then investing in an accounting solution is a wise decision.

Once revenue starts to climb above $25 million, you’ll be looking to hire your own internal team of financial specialists. But until then, the right ecommerce accounting app will help you make smarter decisions and provide the guidance you need at this stage of your business..

Who is managing these Accounting apps?

Accounting is something that the C-suite handles, before handing over to the ongoing management of the CFO.

What are the most important Accounting features?

Above all else, be certain that you’re investing in a tool that specializes in servicing the ecommerce industry and has a nuanced understanding of the truly meaningful KPIs. It is also worthwhile to understand if there are other brands in your vertical successfully using the tool as this will further enhance their ability to offer the most relevant information for your business.

Look for clear reporting with the ability to leverage actionable insights from the financial data that will be compiled for you. Many apps will also offer a sliding scale of functionality aligning to tiered pricing so you can add services as your business becomes more complex.